The C r.m.s.d. of the loops built by Loopy on models computed using the
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RMSD of CC'-loop in all 4 systems, computed versus the first
Redesigning an antibody H3 loop by virtual screening of a small library of human germline-derived sequences
Modeling of protein conformational changes with Rosetta guided by limited experimental data - ScienceDirect
Comparison of methods for antibody structure prediction. All
Computationally Designed Cyclic Peptides Derived from an Antibody Loop Increase Breadth of Binding for Influenza Variants - ScienceDirect
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Activation and friction in enzymatic loop opening and closing dynamics
MD simulation analysis using GROMACS. (A) RMSD plot calculated for the
Serge X Cohen's research works Radboud University Medical Centre
DaReUS-Loop: accurate loop modeling using fragments from remote or unrelated proteins
Frontiers Microsecond MD Simulation and Multiple-Conformation Virtual Screening to Identify Potential Anti-COVID-19 Inhibitors Against SARS-CoV-2 Main Protease
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